Original post:
Nothing beats a good GUI, so after butting heads with gabedit again (and losing - again. Although in this case I think I tried to make it do something it wasn't designed to) I've decided to try Molden.
To download, go here, make sure to be a good citizen and register yourself as a user (will help motivate funding for development) then download: http://www.cmbi.ru.nl/molden/howtoget.html
cd ~/tmp
wget ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden5.0.tar.gz
tar xvf molden5.0.tar.gz
cd molden5.0/surf
edit Makefile and change it from
46 depend: $(DEPEND) 47 @ echo making dependencies... 48 @ echo ' ' > makedep 49 @ makedepend $(INCLUDE) -f makedep $(DEPEND)
to
46 depend: $(DEPEND) 47 @ echo making dependencies... 48 @ echo ' ' > makedep 49 @ $(CC) $(INCLUDE) -M $(DEPEND) > makedep
Save and go back up one level, and run make:
cd ../
make
You're pretty much done.
I like putting things in /opt, so
sudo mkdir /opt/molden
sudo chown $USER /opt/molden
cp ~/tmp/molden5.0/* -R /opt/molden
stick
export PATH=$PATH:/opt/moldenin your ~/.bashrc
Type
molden
to run
Error:
If you don't edit the surf/Makefile as shown above you'll get
make[1]: Leaving directory `/home/me/tmp/molden5.0/ambfor'make -C surf dependmake[1]: Entering directory `/home/me/tmp/molden5.0/surf'making dependencies...make[1]: makedepend: Command not foundmake[1]: *** [depend] Error 127make[1]: Leaving directory `/home/me/tmp/molden5.0/surf'
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