qstat -fqueuename qtype resv/used/tot. load_avg arch states---------------------------------------------------------------------------------eight.q@neon BIP 0/0/8 0.45 lx26-amd64 ---------------------------------------------------------------------------------five.q@boron BIP 0/0/5 6.01 lx26-amd64 ---------------------------------------------------------------------------------six.q@boron BIP 0/6/6 6.01 lx26-amd64 788 0.75000 submit__la user r 09/07/2012 18:36:56 6 ---------------------------------------------------------------------------------two.q@beryllium BIP 0/0/2 0.24 lx26-amd64 ---------------------------------------------------------------------------------four.q@tantalum BIP 0/0/4 0.05 lx26-amd64 E---------------------------------------------------------------------------------three.q@beryllium BIP 0/0/3 0.24 lx26-amd64 ---------------------------------------------------------------------------------main.q@beryllium BIP 0/0/1 0.24 lx26-amd64 ---------------------------------------------------------------------------------main.q@boron BIP 0/0/1 6.01 lx26-amd64 ---------------------------------------------------------------------------------main.q@tantalum BIP 0/0/1 0.05 lx26-amd64 ############################################################################ - PENDING JOBS - PENDING JOBS - PENDING JOBS - PENDING JOBS - PENDING JOBS############################################################################ 789 0.67310 zoli.qsub user qw 09/09/2012 10:00:35 6 802 0.60527 submit__bi user qw 09/10/2012 20:45:24 6 803 0.60525 submit__bi user qw 09/10/2012 20:46:00 6 927 0.25071 submit__ac user qw 09/18/2012 08:24:00 4 928 0.25000 submit__ac user qw 09/18/2012 08:45:52 4
Before you do anything else, free up space and consider moving your scratch dir to a different/separate disk.
Since I keep forgetting how to reset it, here it is -- as a SGE admin do:
/usr/bin/qmod -c four.q@tantalum
me@beryllium changed state of "four.q@tantalum" (no error)
And now everything is good:
qstat -fqueuename qtype resv/used/tot. load_avg arch states---------------------------------------------------------------------------------eight.q@neon BIP 0/0/8 0.25 lx26-amd64 ---------------------------------------------------------------------------------five.q@boron BIP 0/0/5 5.91 lx26-amd64 ---------------------------------------------------------------------------------six.q@boron BIP 0/6/6 5.91 lx26-amd64 788 0.75000 submit__la user r 09/07/2012 18:36:56 6 ---------------------------------------------------------------------------------two.q@beryllium BIP 0/0/2 0.44 lx26-amd64 ---------------------------------------------------------------------------------four.q@tantalum BIP 0/4/4 0.17 lx26-amd64 927 0.25071 submit__ac user r 09/18/2012 11:01:26 4 ---------------------------------------------------------------------------------three.q@beryllium BIP 0/0/3 0.44 lx26-amd64 ---------------------------------------------------------------------------------main.q@beryllium BIP 0/0/1 0.44 lx26-amd64 ---------------------------------------------------------------------------------main.q@boron BIP 0/0/1 5.91 lx26-amd64 ---------------------------------------------------------------------------------main.q@tantalum BIP 0/0/1 0.17 lx26-amd64 ############################################################################ - PENDING JOBS - PENDING JOBS - PENDING JOBS - PENDING JOBS - PENDING JOBS############################################################################ 789 0.67310 zoli.qsub user qw 09/09/2012 10:00:35 6 802 0.60527 submit__bi user qw 09/10/2012 20:45:24 6 803 0.60525 submit__bi user qw 09/10/2012 20:46:00 6 928 0.25000 submit__ac user qw 09/18/2012 08:45:52 4
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